OOMMF
For micromagnetic simulation
OOMMF installation package:
https://math.nist.gov/oommf/software-20.html
The latest tcl/tk packages
http://www.tcl.tk/software/tcltk/download.html
For more info on installing OOMMF:
https://math.nist.gov/oommf/doc/userguide20a2/userguide/Basic_Installation.html
OOMMF Tutorial Series: Deparkes
https://deparkes.co.uk/oommf/oommf-tutorial/
OOMMF Tutorial #1: Michael Donahue
https://www.youtube.com/watch?v=DYyx9wdiO_A
OOMMF Tutorial #2: Michael Donahue
https://www.youtube.com/watch?v=WitgP0ub1g8
OOMMF Tutorial #3: Michael Donahue
https://www.youtube.com/watch?v=jJu1vzDcBYc
OOMMF User Guide (Very Important!!!)
https://math.nist.gov/oommf/doc/userguide20a1/userguide/Standard_Oxs_Ext_Child_Clas.html
Xf_ThermSpinXferEvolve
Mumax3
For micromagnetic simulation
Mumax3 Workshop:
https://mumax.ugent.be/mumax3-workshop/
Mumax3 Workshop Session #1:
https://app.vidgrid.com/view/xx0Epe8ecEOm
Mumax3 Workshop Session #2:
https://app.vidgrid.com/view/uAEYxlllxGrd
Mumax3 Workshop Session #3:
https://app.vidgrid.com/view/8RfT6ZUQg3qw
Mumax3 Workshop Session #4:
https://app.vidgrid.com/view/E5saYa93Ibxm
OriginLab
For data plotting, use OriginLab, there should be free versions provided by the U.
Zotero
For literature citation management, use Zotero.
3ds Max
For 3D imaging plotting, use 3ds Max, student version is free.
https://www.autodesk.com/products/3ds-max/overview?term=1-YEAR&tab=subscription
NEURON
For building and using computational models of neurons and networks of neurons.
https://www.neuron.yale.edu/neuron/
MEArec
Python package for fast and customizable biophysical simulation of extracellular recordings.
https://mearec.readthedocs.io/en/latest/
BioRender
For drawing biological models.
VESTA
For drawing crystal structures.