OOMMF
For micromagnetic simulation
OOMMF installation package:
https://math.nist.gov/oommf/software-20.html
The latest tcl/tk packages
http://www.tcl.tk/software/tcltk/download.html
For more info on installing OOMMF:
https://math.nist.gov/oommf/doc/userguide20a2/userguide/Basic_Installation.html
OOMMF Tutorial Series: Deparkes
https://deparkes.co.uk/oommf/oommf-tutorial/
OOMMF Tutorial #1: Michael Donahue
https://www.youtube.com/watch?v=DYyx9wdiO_A
OOMMF Tutorial #2: Michael Donahue
https://www.youtube.com/watch?v=WitgP0ub1g8
OOMMF Tutorial #3: Michael Donahue
https://www.youtube.com/watch?v=jJu1vzDcBYc
OOMMF User Guide (Very Important!!!)
https://math.nist.gov/oommf/doc/userguide20a1/userguide/Standard_Oxs_Ext_Child_Clas.html
Xf_ThermSpinXferEvolve
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Mumax3
For micromagnetic simulation
Mumax3 Workshop:
https://mumax.ugent.be/mumax3-workshop/
Mumax3 Workshop Session #1:
https://app.vidgrid.com/view/xx0Epe8ecEOm
Mumax3 Workshop Session #2:
https://app.vidgrid.com/view/uAEYxlllxGrd
Mumax3 Workshop Session #3:
https://app.vidgrid.com/view/8RfT6ZUQg3qw
Mumax3 Workshop Session #4:
https://app.vidgrid.com/view/E5saYa93Ibxm
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OriginLab
For data plotting, use OriginLab, there should be free versions provided by the U.
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Zotero
For literature citation management, use Zotero.
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3ds Max
For 3D imaging plotting, use 3ds Max, student version is free.
https://www.autodesk.com/products/3ds-max/overview?term=1-YEAR&tab=subscription
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NEURON
For building and using computational models of neurons and networks of neurons.
https://www.neuron.yale.edu/neuron/
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MEArec
Python package for fast and customizable biophysical simulation of extracellular recordings.
https://mearec.readthedocs.io/en/latest/
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BioRender
For drawing biological models.
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VESTA
For drawing crystal structures.